Progams and scripts

 

A few programs written in the past that have been useful.

RotaMol
Predicting protein size

Allows prediction of protein size based on PDB coordinates from NMR or X-ray crystallography.

Now also allows measurement of protein external electrostatics for a combined measure of size and external charge.

 

DOWNLOAD

 

Google_code_page

Autoit_forum_post

GC
Rapid manipulation of dna sequences

Rapid manipulation of DNA sequences:

Strip white space (returns, tabs etc)

Strip non-DNA letters

Reverse complement

Uppercase-lowercase all

 

DOWNLOAD

 

Autoit_forum_post

 

 

Various scripts and instructions for dealing with some metagenetics data.

Also various python scripts to draw figures, 3D surface plots based on X, Y and Z vairables. Plotting points on maps, and plotting piecharts on maps etc.

 

 

 DOWNLOAD 

 

Git hub repository

GUI interface for quantifying colour differences.

Count pixel number if different from background within an area on screen as defined by mouse clicks

 DOWNLOAD 

 

Git hub repository